Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATGTGCAAGTGTGCCGAGGG
.((((((((((..((((.((..&)).)))).))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001271946
GeneSymbolSLIT3
Binding site4618,4638
Score0.846
Seed1
Au0.456
Energy-18.6
Binding len20
Me-8.429
Phylopstem0.40779715454545457
Phylopflank1.6087454462499993
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure