Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAACTGGACAACAACCACATCAGCTGCAT
.(((((((((((((((.((((&)))))))))))..............)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271946
GeneSymbolSLIT3
Binding site911,945
Score0.923
Seed1
Au0.441
Energy-23.7
Binding len34
Me-3.793
Phylopstem0.9692243448275862
Phylopflank0.3022102687500001
Longest consecutive pairings11
Position of longest consecutive pairings23
Pairings in 3prime end7
PositionCDS
2D Structure