Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCCGGGGCTGGGCTGCAGC
((((((((.(((((.(..((.&))..).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271951
GeneSymbolTPGS2
Binding site254,274
Score0.846
Seed1
Au0.309
Energy-18.6
Binding len20
Me-5.729
Phylopstem0.084918125
Phylopflank0.09873142500000001
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure