Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTGTCAGCCTGTCCCTGCGGCTGTT
..((((((((((..(..((((&.))))..).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271958
GeneSymbolSLC39A1
Binding site737,764
Score1.0
Seed1
Au0.353
Energy-21.7
Binding len20
Me-7.336
Phylopstem-0.004537110999999983
Phylopflank0.18795566125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure