Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGTTGCAGCCATCTACTGCTGCTGTAC
.((((((.((((((((((.(.&).)))))))).......)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271958
GeneSymbolSLC39A1
Binding site1780,1807
Score0.846
Seed1
Au0.485
Energy-19.3
Binding len27
Me-6.107
Phylopstem0.16935992941176473
Phylopflank1.8829835099999999
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end6
Position3UTR
2D Structure