Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTGTCAGCCTGTCCCTGCGGCTGTT
..((((((((((..(..((((&.))))..).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271961
GeneSymbolSLC39A1
Binding site606,633
Score1.0
Seed1
Au0.353
Energy-21.7
Binding len20
Me-7.336
Phylopstem0.020300589000000015
Phylopflank0.3478491390000001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure