Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGTTGCAGCCATCTACTGCTGCTGTAC
.((((((.((((((((((.(.&).)))))))).......)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271961
GeneSymbolSLC39A1
Binding site1649,1676
Score0.923
Seed1
Au0.485
Energy-19.3
Binding len27
Me-6.107
Phylopstem0.8574770705882356
Phylopflank2.4519190349999995
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end6
Position3UTR
2D Structure