Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCCGCCGCCTGTCTGAGCTGCT
..(((((((((((.((..(((&))))).))))).......)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271969
GeneSymbolHSP90AB1
Binding site1447,1472
Score0.846
Seed1
Au0.397
Energy-19.7
Binding len25
Me-5.814
Phylopstem5.856463272222223
Phylopflank5.410501601250002
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure