Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCCGCCGCCTGTCTGAGCTGCT
..(((((((((((.((..(((&))))).))))).......)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271970
GeneSymbolHSP90AB1
Binding site1490,1515
Score0.846
Seed1
Au0.397
Energy-19.7
Binding len25
Me-5.814
Phylopstem4.9028009444444445
Phylopflank4.645688368750001
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure