Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGCAGCTCCCAGAGCCGGAAGAGCAGCTGCAGC
((((((((((((((((..(((&))).))))))...............)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001272003
GeneSymbolKCNT1
Binding site3623,3659
Score0.846
Seed1
Au0.338
Energy-23.4
Binding len36
Me-3.938
Phylopstem1.8035985251612905
Phylopflank3.7922465955
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure