Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCCTGAGTAGCTGCGAC
(((((((((((((((..((((&)))))))))......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001272020
GeneSymbolNRXN3
Binding site6599,6625
Score0.846
Seed1
Au0.412
Energy-23.4
Binding len26
Me-4.171
Phylopstem0.030497857142857143
Phylopflank-0.1168809375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure