Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTCGGCTGCGCTGCGC
.((((((.(((((((.((((.&)))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001272039
GeneSymbolCDK5RAP2
Binding site1322,1341
Score1.0
Seed1
Au0.471
Energy-24.1
Binding len19
Me-6.34
Phylopstem0.2529990714285713
Phylopflank2.0721720925
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure