Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TAACCCAGCTGCAAT
(((((((((.(((((......&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001272042
GeneSymbolRPS6KB1
Binding site2299,2314
Score1.0
Seed1
Au0.618
Energy-21.2
Binding len15
Me-5.413
Phylopstem3.177185666666667
Phylopflank2.5803475925
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure