Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTAAACCTCTGTTGCAAT
(((((((.(.((((..((((.&))))..)))).).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001272043
GeneSymbolRPS6KB1
Binding site1166,1187
Score0.846
Seed1
Au0.529
Energy-19.6
Binding len21
Me-8.462
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure