Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCAGAGCTGCTCAGCTGCT
..((((((((((((.(..(((&)))..).))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001272050
GeneSymbolTK2
Binding site3602,3624
Score0.846
Seed1
Au0.485
Energy-21.6
Binding len22
Me-5.692
Phylopstem-0.19891386428571425
Phylopflank-0.22793027375
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure