Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGCTTTCTCTCAGGCTCCGTGTGCCAGGG
.((((((((((...((.((...&.))..))...)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001272061
GeneSymbolMAGED4
Binding site754,785
Score0.846
Seed1
Au0.324
Energy-20.3
Binding len21
Me-9.286
Phylopstem-0.09519256999999996
Phylopflank1.1257388675
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure