Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCCTAGCTGCC
..(((((((.((((((.....&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001272066
GeneSymbolSHISA5
Binding site1554,1568
Score1.0
Seed1
Au0.324
Energy-20.0
Binding len14
Me-6.2
Phylopstem0.9777839999999998
Phylopflank1.8661170525
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure