Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGGAGGGGTCTGCCCTCCCGCCCATGTTCCAGGGG
...((((((((((((((((((&))))))))))...)))).................)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001272068
GeneSymbolSHISA5
Binding site394,433
Score0.846
Seed0
Au0.309
Energy-27.0
Binding len39
Me-6.515
Phylopstem0.17288751500000005
Phylopflank0.25939348225000003
Longest consecutive pairings10
Position of longest consecutive pairings29
Pairings in 3prime end8
Position5UTR
2D Structure