Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAGACACCAGGCAGCTGCC
..((((((((((.(((.((((&))))..)))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001272068
GeneSymbolSHISA5
Binding site352,374
Score0.923
Seed1
Au0.397
Energy-23.3
Binding len22
Me-6.246
Phylopstem-0.3934250675
Phylopflank0.15383155337500004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure