Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGCGCCGCAGTTGG
...(((((((((.(((..(((&))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001272072
GeneSymbolAOC1
Binding site641,658
Score0.846
Seed0
Au0.382
Energy-20.7
Binding len17
Me-7.804
Phylopstem1.5121834000000003
Phylopflank1.7169852037500004
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure