Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCTGCAGCCCTCAGATTCTGTAT
.((((((((.(((((((((((&)))).)))))))..)))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001272077
GeneSymbolRIT2
Binding site713,739
Score0.846
Seed1
Au0.559
Energy-18.8
Binding len26
Me-5.036
Phylopstem3.3630216666666666
Phylopflank4.081001337500001
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end8
Position3UTR
2D Structure