Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCCTAGCTGCC
..(((((((.((((((.....&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001272082
GeneSymbolSHISA5
Binding site1284,1298
Score0.923
Seed1
Au0.324
Energy-20.0
Binding len14
Me-6.2
Phylopstem-0.8665840000000001
Phylopflank1.54535993625
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure