Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGCGGCTGGGCCGGGTGGGCTGGCTGCAGCGGCTGCAGG
((((((((((.((.((..(((&.))).)).)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001272087
GeneSymbolSLC1A6
Binding site1571,1613
Score0.923
Seed1
Au0.279
Energy-22.1
Binding len22
Me-7.619
Phylopstem1.3617958000000001
Phylopflank1.21710087075
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure