Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTACAGTCTGGGCTGCGC
.(((((((.((((((((((((&)))).))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001272105
GeneSymbolPAQR6
Binding site609,631
Score0.846
Seed1
Au0.324
Energy-21.2
Binding len22
Me-4.85
Phylopstem-1.1054903357142858
Phylopflank-0.37067212
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure