Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGAGATGCATGCGTGTCCAGGC
.(((((.((((.(((((..(((&)))..)))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001272109
GeneSymbolPAQR6
Binding site1335,1357
Score0.846
Seed0
Au0.456
Energy-16.8
Binding len22
Me-8.684
Phylopstem3.8155308
Phylopflank2.7025560249999994
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure