Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTATATTTATGGGTGTTAGCGCAACTGCTTTGCTAGTTGCAAA
((((((((((((((((.....&.))))))))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330437
GeneSymbolPTPN11
Binding site5956,6001
Score0.923
Seed1
Au0.632
Energy-19.9
Binding len24
Me-3.938
Phylopstem2.740832772727273
Phylopflank2.1848774974999996
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end3
Position3UTR
2D Structure