Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGGTTTCTGAACTGCAGCTGGAGCTGCAC
.(((((((.((((((((....&.)))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001273
GeneSymbolCHD4
Binding site1824,1856
Score0.808
Seed1
Au0.456
Energy-25.4
Binding len18
Me-4.85
Phylopstem4.593782375
Phylopflank5.50724686
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure