Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGAACCGCAGACTGGAGA
((.(((((((((((.(.....&).)))))))).))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276272
GeneSymbolMBD4
Binding site1588,1606
Score1.0
Seed0
Au0.529
Energy-19.3
Binding len18
Me-6.231
Phylopstem0.588966025
Phylopflank0.24928991950000004
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end2
PositionCDS
2D Structure