Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCCGCTCCCCGCCTCCGGCCGGGTCCGGGACGCCGCGGCTGTGGG
((((((((((((.(((..((.&.))...))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276282
GeneSymbolATRNL1
Binding site92,141
Score0.846
Seed1
Au0.221
Energy-23.7
Binding len22
Me-5.227
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure