Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTATTTTTGCCAGA
..((((((......((((((((&))))))))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001276286
GeneSymbolBBX
Binding site4276,4294
Score0.923
Seed1
Au0.603
Energy-15.7
Binding len18
Me-15.573
Phylopstem2.8907
Phylopflank2.7560330250000007
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end8
Position3UTR
2D Structure