Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAAAGCAACTGAGACAGACTGCAAT
((((((((((((((((.(((.&)))...)))))))...))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276286
GeneSymbolBBX
Binding site1878,1905
Score0.846
Seed1
Au0.485
Energy-20.7
Binding len27
Me-3.938
Phylopstem1.3991599200000002
Phylopflank2.2671840875000004
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end6
PositionCDS
2D Structure