Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTGCAGCTGCAGG
((((((((((((((.......&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276294
GeneSymbolNISCH
Binding site2410,2425
Score0.923
Seed1
Au0.338
Energy-24.2
Binding len15
Me-4.906
Phylopstem0.08920587142857148
Phylopflank-0.17633738
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure