Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACAGGGGCTGCCGGGG
.(((((((..(..(((((....&)))))..)..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001363770
GeneSymbolLOC102723996
Binding site1794,1812
Score0.846
Seed1
Au0.353
Energy-21.6
Binding len18
Me-10.728
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure