Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCGCAGCCGTAGCCCAGACACCCGCAAG
((((.(((((((((((..(((&)))..)))))))))))..........)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276318
GeneSymbolPPP1R3E
Binding site510,541
Score0.846
Seed0
Au0.279
Energy-22.8
Binding len31
Me-8.057
Phylopstem0.4191949818181818
Phylopflank0.17991282874999998
Longest consecutive pairings11
Position of longest consecutive pairings15
Pairings in 3prime end6
PositionCDS
2D Structure