Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCGGCCGACGGCG
.....(((((((((((.((((&))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276318
GeneSymbolPPP1R3E
Binding site1131,1148
Score0.846
Seed0
Au0.324
Energy-21.0
Binding len17
Me-13.666
Phylopstem-0.07039815
Phylopflank0.27982980375000005
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end7
Position3UTR
2D Structure