Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCTGACGCAGCGCAT
.(((.((((((...(((((..&)))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276318
GeneSymbolPPP1R3E
Binding site750,768
Score0.923
Seed0
Au0.221
Energy-21.1
Binding len18
Me-13.405
Phylopstem-0.2516351666666667
Phylopflank-0.21538787999999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure