Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCCTTATGCAGCTT
....(((((((...((((((.&))))))....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276320
GeneSymbolYOD1
Binding site2503,2521
Score0.846
Seed0
Au0.676
Energy-18.5
Binding len18
Me-15.039
Phylopstem0.37102645714285715
Phylopflank0.23809261249999997
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure