Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAATAATGATCCAAGAAACCCTTGTGGCTGCAT
.(((((((((((((....((.&.))....))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276325
GeneSymbolSETMAR
Binding site1563,1599
Score0.923
Seed1
Au0.574
Energy-18.8
Binding len24
Me-4.762
Phylopstem0.012220199999999983
Phylopflank-0.11475746500000002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure