Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTGCACTGAGCTGTCCCTGGGCCAGCAGCTGCT
..((((((((((((...(((.&.))).)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276343
GeneSymbolAGAP4
Binding site1892,1928
Score0.974
Seed1
Au0.338
Energy-23.3
Binding len19
Me-5.925
Phylopstem1.9665350000000001
Phylopflank2.2378628899999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure