Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCCAGCCTGCAGTCATGCGAG
(((((((((((((((..(((.&)))...))))).)))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276343
GeneSymbolAGAP4
Binding site1478,1503
Score0.846
Seed1
Au0.426
Energy-21.6
Binding len25
Me-4.171
Phylopstem1.4447664166666663
Phylopflank0.9963031612500001
Longest consecutive pairings5
Position of longest consecutive pairings14
Pairings in 3prime end5
PositionCDS
2D Structure