Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGAGCAGACGCCTCCAGGATCTGTCGGCAGCTGCT
..((((((((((((.(.((((&.))))..).)))).....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276345
GeneSymbolTNNT2
Binding site13,50
Score0.846
Seed1
Au0.412
Energy-20.6
Binding len27
Me-5.692
Phylopstem0.2955368823529412
Phylopflank-0.028514064333333314
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure