Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAGGAGCTGTGGCAGAGCAT
.(((.(((((((((.(..(((&)))..).)))))))))...))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276346
GeneSymbolTNNT2
Binding site669,692
Score0.846
Seed0
Au0.456
Energy-18.1
Binding len23
Me-8.648
Phylopstem5.482959222222222
Phylopflank3.60334996125
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end5
PositionCDS
2D Structure