Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAACTGCAGCTGGAC
.(.((((((((((((......&)))))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276373
GeneSymbolUSF1
Binding site965,980
Score1.0
Seed0
Au0.485
Energy-22.0
Binding len15
Me-5.584
Phylopstem3.5270455833333334
Phylopflank4.851189923750001
Longest consecutive pairings12
Position of longest consecutive pairings3
Pairings in 3prime end2
PositionCDS
2D Structure