Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGCATCCAGTCAGCTGCC
..((((((((((.(((..(((&))).))).)).).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276373
GeneSymbolUSF1
Binding site257,278
Score0.923
Seed1
Au0.426
Energy-19.5
Binding len21
Me-6.246
Phylopstem0.83672455
Phylopflank0.386093705
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure