Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTTGGAGCCTTCGCAGCCAGGCAGCTGTGAA
(((((((((((((((((((((&.))))).))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276385
GeneSymbolICE2
Binding site164,199
Score0.846
Seed1
Au0.456
Energy-28.9
Binding len26
Me-3.938
Phylopstem0.20419028333333336
Phylopflank0.29691638149999994
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
Position5UTR
2D Structure