Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGCCAGCCGCCGCAGCAGC
((((.((.(((((((..((((&))))...))))))).)).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276418
GeneSymbolSEC16A
Binding site4427,4450
Score0.846
Seed0
Au0.324
Energy-23.5
Binding len23
Me-10.603
Phylopstem0.3186029999999999
Phylopflank1.6207716849999998
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure