Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTCTAATAGCTCTTGTACAGGGTATCAGATATTGTGCCTTTTGGTGCCAGGTT
((((((((((((((((.(((..&.)))..)))))))........))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001276453
GeneSymbolKPNB1
Binding site4700,4755
Score0.846
Seed1
Au0.544
Energy-20.0
Binding len31
Me-3.938
Phylopstem3.9145935416666675
Phylopflank2.71094916375
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure