Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCCACCACTTATCGGCAGCTGCT
..(((((((((((.(((((((&))))))).)))........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276468
GeneSymbolB4GALNT1
Binding site1146,1174
Score0.846
Seed1
Au0.309
Energy-24.4
Binding len28
Me-5.814
Phylopstem4.45151452631579
Phylopflank3.3753070270000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure