Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGGGCATAAGCAGCTGCAT
.(((((((((...(((..((.&))...)))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276468
GeneSymbolB4GALNT1
Binding site2640,2661
Score0.923
Seed1
Au0.441
Energy-21.5
Binding len21
Me-11.254
Phylopstem0.2380148888888889
Phylopflank0.6052823245000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure