Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATCTTGGTGCCAGGG
.((((((((...((((......&))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001276469
GeneSymbolB4GALNT1
Binding site906,923
Score0.846
Seed1
Au0.397
Energy-17.8
Binding len17
Me-11.207
Phylopstem2.0058112375
Phylopflank2.6225785462499998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure